Method and device for generating pileup file from compressed genomic data
US10394763B2 · kind B2 · utility
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14Claims
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Key dates
| Filing date | May 18, 2016 |
| Grant date | Aug 27, 2019 |
| Priority date | — |
| Expiry date | Dec 2, 2037 |
Classification
- Technology area (CPC G)Physics
- CPC primaryG06F16/16
- WIPO fieldComputer technology
- WIPO sectorElectrical engineering
Abstract
Provided are a method and apparatus for generating a pileup file from a reference-based compression file. The method includes receiving a reference-based compression file comprising a plurality of pieces of read data that are compressed, partially decompressing the plurality of pieces of read data to acquire a differential string associated with the plurality of pieces of read data, and generating the pileup file by decoding the differential string based on a plurality of conversion rules.
Source: USPTO / EPO open patent data. Objective bibliographic and citation counts.