Automated pipeline
US10671632B1 · kind B1 · utility
Assignee
Inventor
Key dates
| Filing date | Sep 3, 2019 |
| Grant date | Jun 2, 2020 |
| Priority date | — |
| Expiry date | Sep 3, 2039 |
Classification
- Technology area (CPC G)Physics
- CPC primaryG16B40/20
- WIPO fieldComputer technology
- WIPO sectorElectrical engineering
Abstract
The methods and system disclose an automated pipeline which receives a list of Accession IDs corresponding to transcriptomic, proteomic, genomic, or metabolomic data. Each Accession ID is submitted in parallel, launching a specific cloud computer to carry out a customized, fully automated transcriptome assembly (or proteomic assembly or genome assembly or metabolome assembly) and analysis by the automated pipeline. The output from multiple assemblies is automatically compiled and compared with genes of interest to identify new gene variants. The new gene variants can be used as queries by the automated pipeline to: discover variants of the variants; and determine new studies to analyze.
Source: USPTO / EPO open patent data. Objective bibliographic and citation counts.