Patent · US Active

FPGA-based resequencing analysis method and device

US11836430B2 · kind B2 · utility

0Cited by

0References

8Claims

0Family size

Assignee

MGI Tech Co., Ltd. · CN

Inventors

Yinlong Xie · Lo Wu, CN
Weihua Huang · Shanghai, CN
Chen Chen · Hangzhou City, CN
Jingbo Tang · Lo Wu, CN

Key dates

Filing date	Oct 23, 2018
Grant date	Dec 5, 2023
Priority date	—
Expiry date	Dec 12, 2039

Classification

Technology area (CPC G)Physics
CPC primaryG06N3/126
WIPO fieldComputer technology
WIPO sectorElectrical engineering

Abstract

Proposed by the present disclosure are an FPGA-based resequencing analysis method and device, wherein the method comprises: receiving genomic resequencing data; using the resequencing data as an input of an FPGA, determining a comparison result in the resequencing process according to an output of the FPGA, and simultaneously performing sorting and deduplication processing on the comparison result; correcting a base quality value of the comparison result after sorting and deduplication processing; and detecting a mutation result according to the corrected comparison result. The described method may save program running time, save calculation costs, and improve resequencing efficiency.

Source: USPTO / EPO open patent data. Objective bibliographic and citation counts.