Bifunctional Crosslinking oligonucleotides adapted for linking to a target sequence of duplex DNA
US6312953A · kind A · utility
Assignee
Inventors
Key dates
| Filing date | Jun 27, 1994 |
| Grant date | Nov 6, 2001 |
| Priority date | — |
| Expiry date | Jun 27, 2014 |
Classification
- Technology area (CPC C)Chemistry; Metallurgy
- CPC primaryC07H21/00
- WIPO fieldOrganic fine chemistry
- WIPO sectorChemistry
Abstract
Chemically modified oligonucleotides (ODNS) are complementary, either in the sense of the classic "four letter code" recognition motif, or in the sense required for triple strand formation based on the more limited "two letter code recognition motif", to a target sequence of double stranded DNA of an invading cell, organism or pathogen, such as a virus, fungus, parasite, bacterium, malignant cell, or any duplex DNA which is desired to be broken into segments for the purpose of "mapping". The ODNs have cross-linking agents covalently attached at least to two different sites of the ODN. Alternatively, the cross-linking agent which is attached to one site on the ODN has two cross-linking functionalities, and therefore in effect comprises two cross-linking agents. The cross-linking agent typically includes a linker arm (such as an alkyl, alkoxy, aminoalkyl or amidoalkyl chain) and a reactive group which, after triple strand formation with the target sequence of DNA, is capable of reacting with the target DNA to form a covalent bond therewith. Each cross-linking agent of the novel modified ODNs is capable of forming a covalent bond with the target DNA. As a result of the covalent bond f…
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